decodeShortGenomeSeq
Syntax
decodeShortGenomeSeq(X)
Alias: decodeSGS
Arguments
X is an integral scalar/vector.
Details
Decode the DNA sequences which have been encoded with encodeShortGenomeSeg
.
Return Value: STRING or STRING VECTOR
Examples
$ a=encodeShortGenomeSeq("TCGATCG")
$ decodeShortGenomeSeq(a)
"TCGATCG"
$ b=encodeShortGenomeSeq("TCGATCG" "TCGATCGCCC")
$ decodeShortGenomeSeq(b)
["TCGATCG","TCGATCGCCC"]
//When the input is empty, an empty string is returned.
$ decodeShortGenomeSeq(int(NULL))
""
//encodeShortGenomeSeq returns NULL as the input exceeds 28 characters after “TCGATCG“ is repeated 5 times. As a result, when decoding it, an empty string is returned.
$ c=encodeShortGenomeSeq(repeat("TCGATCG" "TCGAT", 5))
$ decodeShortGenomeSeq(c)
[,"TCGATTCGATTCGATTCGATTCGAT"]
Related functions: encodeShortGenomeSeq, genShortGenomeSeq